| Type | Gene1 | Effect | Gene2 | Sentence | MedLine Reference | Time of Interaction in evidence | # of References | territories of interaction | Evidence for Direct | Last author | Journal | Year | |||||||||||||||||||||||||||||||||||||||||||||||
| Binding | activin | neutral | bmp3 | A role for a BMP ligand acting as a BMP antagonist has been reported for the more distantly related BMP3, which binds to the BMP and activin receptor ActRII without activating it, thus acting as a receptor inhibitor (Daluiski et al., 2001 and Gamer et al. | 1 | urn:agi-Binding:inout-urn:agi-llid:651:inout-urn:agi-go:0017002: | digtext:http://www.ncbi.nlm.nih.gov/entrez/utils/fref.fcgi?PrId=3048&itool=AbstractPlus-def&uid=16828077&db=pubmed&url=http://linkinghub.elsevier.com/retrieve/pii/S0012-1606(06)00880-3 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Binding | activin | neutral | bmp2a | In this study, we have exploited the well characterized model of Xenopus mesoderm induction to determine the intracellular interactions between BMP-2/4 and activin/BVg1 signaling cascades. | 9409665:3 | 3 | urn:agi-Binding:inout-urn:agi-llid:650:inout-urn:agi-go:0016915: | digtext:http://www.sciencedirect.com/science?_ob=GatewayURL&_origin=inwardhub&_urlversion=4&_method=citationSearch&_piikey=S1534580708001172&_referrer=www.ncbi.nlm.nih.gov/pubmed/18477456?ordinalpos=1&itool=EntrezSystem2.PEntrez.Pubmed.Pubmed_ResultsPa... | |||||||||||||||||||||||||||||||||||||||||||||||||||
| Binding | activin | neutral | bmp7 | BMP-7 can interact with activin type I and type II receptors in addition to BMP-2/BMP-4 receptors ( 26 , 28 ). | 9268344:10043 | 5 | Mus musculus | urn:agi-Binding:inout-urn:agi-llid:655:inout-urn:agi-go:0016915: | digtext:http://www.ncbi.nlm.nih.gov/entrez/utils/fref.fcgi?PrId=3051&itool=AbstractPlus-def&uid=17483092&db=pubmed&url=http://www.jbc.org/cgi/pmidlookup?view=long&pmid=17483092 | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Regulation | acvr1 | positive | bmp4 | A constitutively active Alk8-TGFbeta-receptor can ectopically induce bmp2b and bmp4 and rescues the dorsalization of MZspg. | 16775002:9 | 1 | urn:agi-Regulation:inout-urn:agi-llid:90:out-urn:agi-llid:652::positive | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Expression | acvr1 | positive | bmp2a | Since Bmps act as negative regulators of chordin expression (Schulte-Merker et al., 1998), and CA and KM Alk8 affect the expression of bmps2b and -4, it is expected that chordin expression would also be affected. | 2 | urn:agi-Expression:inout-urn:agi-llid:90:out-urn:agi-llid:650::positive | digtext:http://www.ncbi.nlm.nih.gov/entrez/utils/fref.fcgi?PrId=3048&itool=AbstractPlus-def&uid=11165484&db=pubmed&url=http://linkinghub.elsevier.com/retrieve/pii/S0925477300005414 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Expression | acvr1 | negative | bmp4 | In contrast, KM Alk8 down regulates ventral bmp2b expression in shield stage embryos (data not shown). | 2 | urn:agi-Expression:inout-urn:agi-llid:90:out-urn:agi-llid:652::negative | digtext:http://www.ncbi.nlm.nih.gov/entrez/utils/fref.fcgi?PrId=3048&itool=AbstractPlus-def&uid=11165484&db=pubmed&url=http://linkinghub.elsevier.com/retrieve/pii/S0925477300005414 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Expression | acvr1 | neutral | bmp4 | Together, these results show that Mrdr and alk8 strongly interact to positively regulate the onset of bmp2b/4 expression. | 3 | urn:agi-Expression:inout-urn:agi-llid:90:out-urn:agi-llid:652::unknown | digtext:http://www.ncbi.nlm.nih.gov/entrez/utils/fref.fcgi?PrId=3494&itool=AbstractPlus-nondef&uid=12601179&db=pubmed&url=http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pubmed&pubmedid=12601179 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Expression | acvr1 | positive | bmp4 | This indicates that pou2 acts upstream of Alk8, a maternally provided receptor implicated in the activation of zygotic bmp2b and bmp4 transcription. | 16775002:10 | 16 | urn:agi-Expression:inout-urn:agi-llid:90:out-urn:agi-llid:652::positive | digtext:http://www.ncbi.nlm.nih.gov/entrez/utils/fref.fcgi?PrId=3048&itool=AbstractPlus-def&uid=11165484&db=pubmed&url=http://linkinghub.elsevier.com/retrieve/pii/S0925477300005414 | |||||||||||||||||||||||||||||||||||||||||||||||||||
| Binding | acvr1 | neutral | bmp7 | OP-1 bound to ALK-2 and ALK-6 efficiently, and to ALK-3 less efficiently, whereas BMP-4 bound to ALK-3 and ALK-6 efficiently. | 8006002:6 | 21 | Mus musculus | Curated | bone | urn:agi-Binding:inout-urn:agi-llid:90:inout-urn:agi-llid:655: | digtext:http://dev.biologists.org/cgi/reprint/128/6/849.pdf | url(http%3a//dev.biologists.org/cgi/reprint/128/6/849.pdf):pdf | |||||||||||||||||||||||||||||||||||||||||||||||
| Expression | acvr1 | positive | bmp2b | injected mRNA encoding a constitutively active version of Alk8 can rescue the strong dorsalization of bmp2b/swirl mutants. | overexpression | 4.66 | mesendoderm | blastoderm | 2 | Hammerschmidt, M. | Development | 2001 | |||||||||||||||||||||||||||||||||||||||||||||||
| Expression | acvr1 | positive | bmp7 | injected mRNA encoding a constitutively active version of Alk8 can rescue the strong dorsalization of bmp7/snailhouse mutants | overexpression | 4.66 | mesendoderm | blastoderm | 2 | Hammerschmidt, M. | Development | 2001 | |||||||||||||||||||||||||||||||||||||||||||||||
| Binding | acvr2b | neutral | bmpr1a | Moreover, ActRIIB can recruit both Alk4 for activin-like signaling and Alk3 for BMP-like signaling (Massague and Chen 2000 ). | 3240211037 | 2 | Curated | egg | urn:agi-Binding:inout-urn:agi-llid:93:inout-urn:agi-llid:657: | digtext:http://www.ncbi.nlm.nih.gov/entrez/utils/fref.fcgi?PrId=3051&itool=AbstractPlus-def&uid=17483092&db=pubmed&url=http://www.jbc.org/cgi/pmidlookup?view=long&pmid=17483092 | |||||||||||||||||||||||||||||||||||||||||||||||||
| Binding | acvr2b | neutral | bmp2a | Consistent with previous observations on the Drosophila type II receptor, punt ( 56 ), we were unable to observe any binding of BMP-2 to ActRII (Fig. 7 A , lane 8 ) or ActRIIB (data not shown) when these receptors were expressed alone. | 9872992:10251 | 5 | AGI interparalog | urn:agi-Binding:inout-urn:agi-llid:93:inout-urn:agi-llid:650: | digtext:http://www.ncbi.nlm.nih.gov/entrez/utils/fref.fcgi?PrId=3051&itool=AbstractPlus-def&uid=17483092&db=pubmed&url=http://www.jbc.org/cgi/pmidlookup?view=long&pmid=17483092 | 6.9999 | |||||||||||||||||||||||||||||||||||||||||||||||||
| Regulation | ascl1a | unknown | bmp2a | During development of the autonomous nervous system of the mouse, expression of another vertebrate proneural genehomologue, Mash1 , has been proposed to depend on BMP2 signalling (Shah et al., 1996). | 1 | urn:agi-Regulation:inout-urn:agi-llid:429:out-urn:agi-llid:650::unknown | digtext:http://dev.biologists.org/cgi/reprint/124/22/4557.pdf | url(http%3a//dev.biologists.org/cgi/reprint/124/22/4557.pdf):pdf | |||||||||||||||||||||||||||||||||||||||||||||||||||
| Binding | bmp1a | neutral | bmp4 | BMP1 Prodomain Sequences Specifically Bind BMP2/4 with High Affinity—To more closely explore the ability of BMP1 prodomain sequences to interact with TGF-?-like BMPs, BMP1 prodomain, free of other sequences other than a COOH-terminal His tag, was produced | 1 | urn:agi-Binding:inout-urn:agi-llid:652:inout-urn:agi-llid:649: | digtext:http://www.ncbi.nlm.nih.gov/entrez/utils/fref.fcgi?PrId=3051&itool=AbstractPlus-def&uid=17255107&db=pubmed&url=http://www.jbc.org/cgi/pmidlookup?view=long&pmid=17255107 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Binding | bmp1a | neutral | bmp4 | BMP1 Prodomain Sequences Specifically Bind BMP2/4 with High Affinity—To more closely explore the ability of BMP1 prodomain sequences to interact with TGF-?-like BMPs, BMP1 prodomain, free of other sequences other than a COOH-terminal His tag, was produced | 1 | urn:agi-Binding:inout-urn:agi-llid:652:inout-urn:agi-llid:649: | digtext:http://www.ncbi.nlm.nih.gov/entrez/utils/fref.fcgi?PrId=3051&itool=AbstractPlus-def&uid=17255107&db=pubmed&url=http://www.jbc.org/cgi/pmidlookup?view=long&pmid=17255107 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Binding | bmp1a | neutral | bmp2a | The copurification suggested that BMP-1 and BMP-2 might physically interact, leading to the idea that Tolloid might increase DPP activity by proteolytically processing DPP precursors ( Shimell et al., 1991 ; Childs and O'Connor, 1994 ; Finelli et al., 199 | 101000938:11026 | 2 | urn:agi-Binding:inout-urn:agi-llid:650:inout-urn:agi-llid:649: | digtext:http://www.ncbi.nlm.nih.gov/entrez/utils/fref.fcgi?PrId=3051&itool=AbstractPlus-def&uid=17255107&db=pubmed&url=http://www.jbc.org/cgi/pmidlookup?view=long&pmid=17255107 | |||||||||||||||||||||||||||||||||||||||||||||||||||
| Binding | bmp1a | neutral | bmp2a | The copurification suggested that BMP-1 and BMP-2 might physically interact, leading to the idea that Tolloid might increase DPP activity by proteolytically processing DPP precursors ( Shimell et al., 1991 ; Childs and O'Connor, 1994 ; Finelli et al., 199 | 101000938:11026 | 2 | urn:agi-Binding:inout-urn:agi-llid:650:inout-urn:agi-llid:649: | digtext:http://www.ncbi.nlm.nih.gov/entrez/utils/fref.fcgi?PrId=3051&itool=AbstractPlus-def&uid=17255107&db=pubmed&url=http://www.jbc.org/cgi/pmidlookup?view=long&pmid=17255107 | |||||||||||||||||||||||||||||||||||||||||||||||||||
| Regulation | bmp1a | negative | chd | Here we show that Xenopus BMP1 blocks the dorsalising activity of chordin, but not noggin or DeltaxBMPR, when coexpressed in the ventral marginal zone and degrades chordin protein in vitro. | 10446267:1 | 5 | Mus musculus | mesoderm | urn:agi-Regulation:inout-urn:agi-llid:649:out-urn:agi-llid:8646::negative | digtext:http://www.nature.com/ncb/journal/v8/n4/full/ncb0406-305.html | |||||||||||||||||||||||||||||||||||||||||||||||||
| Expression | bmp2a | neutral | fgf8a | As bmp2 and bmp4 ventral expression never appaeared when fgf8a was overexpressed, this suggests that FGF-8 prevents the initiation of the expression of bmp2 and bmp4 in the ventral territory. | 1 | urn:agi-Expression:inout-urn:agi-llid:650:out-urn:agi-llid:2253::unknown | digtext:http://dev.biologists.org/cgi/reprint/124/21/4253.pdf | url(http%3a//dev.biologists.org/cgi/reprint/124/21/4253.pdf):pdf | |||||||||||||||||||||||||||||||||||||||||||||||||||
| Binding | bmp2a | neutral | msxd | In mammals, Bmp2, Msx2, Sox9, Col2a1, Runx2 and Col1a1 interact in the developmental pathway leading from neural crest to cartilage and bone (Healy et al., 1999; Mori-Akiyama et al., 2003; Takahashi et al., 2001). | 1 | urn:agi-Binding:inout-urn:agi-llid:650:inout-urn:agi-llid:4488: | digtext:http://www.ncbi.nlm.nih.gov/entrez/utils/fref.fcgi?PrId=3051&itool=AbstractPlus-def&uid=15689370&db=pubmed&url=http://dev.biologists.org/cgi/pmidlookup?view=long&pmid=15689370 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Expression | bmp2a | neutral | myod1 | It has been shown that embryonic expression of Xenopus MyoD or Myf5 requires a specific level of BMP signaling (Re'em-Kalma et al. 1995; Dosch et al. 1997), which is regulated by BMP2, bmp4, and BMP7 expressed in ventral regions of the embryo, and BMP ant | 1 | urn:agi-Expression:inout-urn:agi-llid:650:out-urn:agi-llid:4654::unknown | digtext:http://www.ncbi.nlm.nih.gov/entrez/utils/fref.fcgi?PrId=3051&itool=AbstractPlus-def&uid=9450925&db=pubmed&url=http://www.genesdev.org/cgi/pmidlookup?view=long&pmid=9450925 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Binding | bmp2a | neutral | sox9a | In mammals, Bmp2, Msx2, Sox9, Col2a1, Runx2 and Col1a1 interact in the developmental pathway leading from neural crest to cartilage and bone (Healy et al., 1999; Mori-Akiyama et al., 2003; Takahashi et al., 2001). | 1 | urn:agi-Binding:inout-urn:agi-llid:6662:inout-urn:agi-llid:650: | digtext:http://www.ncbi.nlm.nih.gov/entrez/utils/fref.fcgi?PrId=3051&itool=AbstractPlus-def&uid=15689370&db=pubmed&url=http://dev.biologists.org/cgi/pmidlookup?view=long&pmid=15689370 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Expression | bmp2a | neutral | tbx2b | It has been reported that BMP-2 regulated tbx2 expression, an endogenous inhibitor of cardiac differentiation, in the mouse developing hearts [9]. | 1 | urn:agi-Expression:inout-urn:agi-llid:650:out-urn:agi-llid:6909::unknown | digtext:http://www.ncbi.nlm.nih.gov/entrez/utils/fref.fcgi?PrId=3051&itool=AbstractPlus-def&uid=17367767&db=pubmed&url=http://cardiovascres.oxfordjournals.org/cgi/pmidlookup?view=long&pmid=17367767 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Expression | bmp2a | positive | tbx2b | It has been reported that BMP-2 regulated tbx2 expression, an endogenous inhibitor of cardiac differentiation, in the mouse developing hearts [9]. | 1 | urn:agi-Expression:inout-urn:agi-llid:650:out-urn:agi-llid:6909::positive | digtext:http://www.ncbi.nlm.nih.gov/entrez/utils/fref.fcgi?PrId=3051&itool=AbstractPlus-def&uid=17367767&db=pubmed&url=http://cardiovascres.oxfordjournals.org/cgi/pmidlookup?view=long&pmid=17367767 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Binding | bmp2a | neutral | col1a1 | In mammals, Bmp2, Msx2, Sox9, Col2a1, Runx2 and Col1a1 interact in the developmental pathway leading from neural crest to cartilage and bone (Healy et al., 1999; Mori-Akiyama et al., 2003; Takahashi et al., 2001). | 2 | AGI interparalog | urn:agi-Binding:inout-urn:agi-llid:650:inout-urn:agi-llid:1277: | digtext:http://www.ncbi.nlm.nih.gov/entrez/utils/fref.fcgi?PrId=3051&itool=AbstractPlus-def&uid=15689370&db=pubmed&url=http://dev.biologists.org/cgi/pmidlookup?view=long&pmid=15689370 | 0.8900 | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Regulation | bmp2a | positive | mef2a | In cardiac precursor cells, BMP-2 has recently been shown to induce expression of cardiac transcription factors, including myocyte enhancer factor 2A (MEF-2A). | 12663654:1 | 2 | Mus musculus | urn:agi-Regulation:inout-urn:agi-llid:650:out-urn:agi-llid:4205::positive | digtext:http://www.ncbi.nlm.nih.gov/entrez/utils/fref.fcgi?PrId=3051&itool=AbstractPlus-def&uid=17367767&db=pubmed&url=http://cardiovascres.oxfordjournals.org/cgi/pmidlookup?view=long&pmid=17367767 | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Expression | bmp2a | neutral | myf5 | It has been shown that embryonic expression of Xenopus MyoD or Myf5 requires a specific level of BMP signaling (Re'em-Kalma et al. 1995 ; Dosch et al. 1997 ), which is regulated by BMP2, bmp4, and BMP7 expressed in ventral regions of the embryo, and BMP a | 9450925:10031 | 2 | Mus musculus | urn:agi-Expression:inout-urn:agi-llid:650:out-urn:agi-llid:4617::unknown | digtext:http://www.ncbi.nlm.nih.gov/entrez/utils/fref.fcgi?PrId=3051&itool=AbstractPlus-def&uid=9450925&db=pubmed&url=http://www.genesdev.org/cgi/pmidlookup?view=long&pmid=9450925 | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Binding | bmp2a | neutral | runx2a | In mammals, Bmp2, Msx2, Sox9, Col2a1, Runx2 and Col1a1 interact in the developmental pathway leading from neural crest to cartilage and bone (Healy et al., 1999; Mori-Akiyama et al., 2003; Takahashi et al., 2001). | 2 | AGI interparalog | urn:agi-Binding:inout-urn:agi-llid:860:inout-urn:agi-llid:650: | digtext:http://www.ncbi.nlm.nih.gov/entrez/utils/fref.fcgi?PrId=3051&itool=AbstractPlus-def&uid=15689370&db=pubmed&url=http://dev.biologists.org/cgi/pmidlookup?view=long&pmid=15689370 | 0.9400 | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Expression | bmp2a | positive | zic1 | To address the question whether BMP2 signalling affects the extent of zic1 expression, we analysed swirl and chordino mutant embryos. | 10415355:1 | 2 | egg | urn:agi-Expression:inout-urn:agi-llid:650:out-urn:agi-llid:7545::positive | digtext:http://www.ncbi.nlm.nih.gov/entrez/utils/fref.fcgi?PrId=3048&itool=AbstractPlus-def&uid=10415355&db=pubmed&url=http://linkinghub.elsevier.com/retrieve/pii/S0925-4773(99)00044-1 | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Binding | bmp2a | neutral | col2a1a | In mammals, Bmp2, Msx2, Sox9, Col2a1, Runx2 and Col1a1 interact in the developmental pathway leading from neural crest to cartilage and bone (Healy et al., 1999; Mori-Akiyama et al., 2003; Takahashi et al., 2001). | 10085302 | 3 | Entrez Gene | urn:agi-Binding:inout-urn:agi-llid:650:inout-urn:agi-llid:1280: | digtext:http://www.ncbi.nlm.nih.gov/entrez/utils/fref.fcgi?PrId=3051&itool=AbstractPlus-def&uid=15689370&db=pubmed&url=http://dev.biologists.org/cgi/pmidlookup?view=long&pmid=15689370 | 0.9200 | |||||||||||||||||||||||||||||||||||||||||||||||||
| Expression | bmp2a | positive | gata5 | In chicken embryos, Bmp2 that is located medially to the heart-forming region induced the expression of Nkx2-5 and Gata4/5/6, whereas repression of Bmp signaling by Noggin-expressing cells, which are implanted in precardiac mesoderm, abolished Nkx2-5 and | 3 | urn:agi-Expression:inout-urn:agi-llid:650:out-urn:agi-llid:140628::positive | digtext:http://www.ncbi.nlm.nih.gov/entrez/utils/fref.fcgi?PrId=3494&itool=AbstractPlus-nondef&uid=18000065&db=pubmed&url=http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pubmed&pubmedid=18000065 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Expression | bmp2a | positive | gata6 | In chicken embryos, Bmp2 that is located medially to the heart-forming region induced the expression of Nkx2-5 and Gata4/5/6, whereas repression of Bmp signaling by Noggin-expressing cells, which are implanted in precardiac mesoderm, abolished Nkx2-5 and | 3 | urn:agi-Expression:inout-urn:agi-llid:650:out-urn:agi-llid:2627::positive | digtext:http://www.ncbi.nlm.nih.gov/entrez/utils/fref.fcgi?PrId=3494&itool=AbstractPlus-nondef&uid=18000065&db=pubmed&url=http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pubmed&pubmedid=18000065 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Expression | bmp2a | positive | mef2a | In cardiac precursor cells, BMP-2 has recently been shown to induce expression of cardiac transcription factors, including myocyte enhancer factor 2A (MEF-2A). | 12663654:1 | 3 | Mus musculus | urn:agi-Expression:inout-urn:agi-llid:650:out-urn:agi-llid:4205::positive | digtext:http://www.ncbi.nlm.nih.gov/entrez/utils/fref.fcgi?PrId=3051&itool=AbstractPlus-def&uid=17367767&db=pubmed&url=http://cardiovascres.oxfordjournals.org/cgi/pmidlookup?view=long&pmid=17367767 | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Expression | bmp2a | positive | wnt3l | Moreover, BMP-2 enhanced Wntl and Wnt3a expression in our cells. | 14584895:12 | 3 | Mus musculus | mesenchyma | urn:agi-Expression:inout-urn:agi-llid:650:out-urn:agi-llid:89780::positive | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Expression | bmp2a | positive | admp | When ventral BMP2/4/7 signals are depleted, admp expression increases, allowing for self-regulation. | 16360041:4 | 4 | egg | urn:agi-Expression:inout-urn:agi-llid:650:out-urn:agi-llid:165679::positive | digtext:http://www.ncbi.nlm.nih.gov/entrez/utils/fref.fcgi?PrId=3048&itool=AbstractPlus-def&uid=11784095&db=pubmed&url=http://linkinghub.elsevier.com/retrieve/pii/S0012160601904944 | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Expression | bmp2a | negative | bmp4 | In contrast to the situation in Xenopus, where BMP2/4/7 are provided maternally and may create a default state, the delayed zygotic initiation of ubiquitous bmp2b/4/7 expression in the zebrafish embryo could be interpreted as a ventral default setting of | 4 | urn:agi-Expression:inout-urn:agi-llid:650:out-urn:agi-llid:652::negative | digtext:http://www.ncbi.nlm.nih.gov/entrez/utils/fref.fcgi?PrId=3494&itool=AbstractPlus-nondef&uid=12682283&db=pubmed&url=http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pubmed&pubmedid=12682283 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Expression | bmp2a | positive | gata4 | Initially, BMPs (especially BMP-2 and/or BMP-4) transactivate the expression of two major cardiac-specific transcription factors, Csx/Nkx-2.5 and GATA-4. | 10490646:10269 | 4 | Mus musculus | urn:agi-Expression:inout-urn:agi-llid:650:out-urn:agi-llid:2626::positive | digtext:http://www.ncbi.nlm.nih.gov/entrez/utils/fref.fcgi?PrId=3494&itool=AbstractPlus-nondef&uid=18000065&db=pubmed&url=http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pubmed&pubmedid=18000065 | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Binding | bmp2a | neutral | twsg1a | Based on previous findings that vertebrate TSG, Chordin, and BMP-2/4 form a ternary complex ( 24 ? 26 ) and on the present finding that mouse TSG binds only heparin in the presence of Chordin and/or BMP-2/4, we suggest that establishment of high local con | 15381701:10271 | 4 | Mus musculus | bone | urn:agi-Binding:inout-urn:agi-llid:650:inout-urn:agi-llid:57045: | digtext:http://www.ncbi.nlm.nih.gov/entrez/utils/fref.fcgi?PrId=3051&itool=AbstractPlus-def&uid=17483092&db=pubmed&url=http://www.jbc.org/cgi/pmidlookup?view=long&pmid=17483092 | |||||||||||||||||||||||||||||||||||||||||||||||||
| Expression | bmp2a | positive | wnt | We examined BMP-2-dependent expression of Wnt and its receptor frizzled in normal human keratinocytes. | 16442268:2 | 4 | Mus musculus | egg | urn:agi-Expression:inout-urn:agi-llid:650:out-urn:agi-go:0042813::positive | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Expression | bmp2a | negative | bmp4 | In contrast to the situation in Xenopus, where BMP2/4/7 are provided maternally and may create a default state, the delayed zygotic initiation of ubiquitous bmp2b/4/7 expression in the zebrafish embryo could be interpreted as a ventral default setting of | 4 | urn:agi-Expression:inout-urn:agi-llid:650:out-urn:agi-llid:652::negative | digtext:http://www.ncbi.nlm.nih.gov/entrez/utils/fref.fcgi?PrId=3494&itool=AbstractPlus-nondef&uid=12682283&db=pubmed&url=http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pubmed&pubmedid=12682283 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Regulation | bmp2a | positive | tbx2b | Bmp2 within the developing AVC and IC has been shown to induce Tbx2, and we found that Tbx2 misexpression inhibited the expression of both Hey1 and Hey2. | 17021042:5 | 6 | urn:agi-Regulation:inout-urn:agi-llid:650:out-urn:agi-llid:6909::positive | digtext:C:\Documents and Settings\yuh\Desktop\zebrafish GRN Literatures\Mercola-M-2006.pdf | url(C%3a%5cDocuments%20and%20Settings%5cyuh%5cDesktop%5czebrafish%20GRN%20Literatures%5cMercola-M-2006.pdf):pdf | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Expression | bmp2a | positive | hhex | In vivo induction assays show that the ability of BMP2 to activate Hex expression in the endoderm is restricted to a region that is only slightly larger than the endogenous domain of Hex expression. | 15063170:6 | 7 | Mus musculus | endoderm | urn:agi-Expression:inout-urn:agi-llid:650:out-urn:agi-llid:3087::positive | digtext:http://www.ncbi.nlm.nih.gov/entrez/utils/fref.fcgi?PrId=3048&itool=AbstractPlus-def&uid=10531010&db=pubmed&url=http://linkinghub.elsevier.com/retrieve/pii/S0960-9822(99)80485-0 | |||||||||||||||||||||||||||||||||||||||||||||||||
| Binding | bmp2a | neutral | chd | Chordin also binds BMP2, bmp4, and BMP7 in a way similar to noggin ( 20 ). | 12702725:10220 | 8 | Mus musculus | urn:agi-Binding:inout-urn:agi-llid:8646:inout-urn:agi-llid:650: | digtext:http://www.ncbi.nlm.nih.gov/entrez/utils/fref.fcgi?PrId=3051&itool=AbstractPlus-def&uid=17255107&db=pubmed&url=http://www.jbc.org/cgi/pmidlookup?view=long&pmid=17255107 | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Expression | bmp2a | positive | nkx2.5 | Inhibition of either SPARC or Bmp2 attenuated in both cases cardiomyogenesis and downregulated nkx2.5 expression. | 16165126:5 | 8 | Mus musculus | mesoderm | urn:agi-Expression:inout-urn:agi-llid:650:out-urn:agi-llid:1482::positive | digtext:http://www.ncbi.nlm.nih.gov/entrez/utils/fref.fcgi?PrId=3494&itool=AbstractPlus-nondef&uid=18000065&db=pubmed&url=http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pubmed&pubmedid=18000065 | |||||||||||||||||||||||||||||||||||||||||||||||||
| Expression | bmp2a | positive | her15.1 | In this paper, we show that BMP2 enhances Notch-induced transcriptional activation of Hes-5 and Hesr-1 in mouse neuroepithelial cells. | 14500836:3 | 9 | Mus musculus | urn:agi-Expression:inout-urn:agi-llid:650:out-urn:agi-llid:256482::positive | digtext:http://www.ncbi.nlm.nih.gov/entrez/utils/fref.fcgi?PrId=3048&itool=AbstractPlus-def&uid=12351167&db=pubmed&url=http://linkinghub.elsevier.com/retrieve/pii/S0925477302002526 | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Binding | bmp2a | neutral | fsta | We provide data which show that Follistatin binds BMP-7 and BMP-2 at low affinities and that the binding is reversible. | 11846481:5 | 10 | Mus musculus | muscle | urn:agi-Binding:inout-urn:agi-llid:650:inout-urn:agi-llid:10468: | digtext:http://www.ncbi.nlm.nih.gov/entrez/utils/fref.fcgi?PrId=3048&itool=AbstractPlus-def&uid=9882485&db=pubmed&url=http://linkinghub.elsevier.com/retrieve/pii/S0012-1606(98)99003-0 | |||||||||||||||||||||||||||||||||||||||||||||||||
| Expression | bmp2a | positive | msxd | Interestingly the expression of Msx2 was induced by bone morphogenetic protein 2 treatment in Runx2-deficient mesenchymal cells. | 15175325:5 | 12 | Mus musculus | mesenchyma | urn:agi-Expression:inout-urn:agi-llid:650:out-urn:agi-llid:4488::positive | digtext:http://www.ncbi.nlm.nih.gov/entrez/utils/fref.fcgi?PrId=3051&itool=AbstractPlus-def&uid=14551209&db=pubmed&url=http://www.jbc.org/cgi/pmidlookup?view=long&pmid=14551209 | |||||||||||||||||||||||||||||||||||||||||||||||||
| Binding | bmp2a | neutral | nog1 | Noggin binds to BMP-2/4 with high affinity, and prevents binding to cell surface receptors. | 10657699:2 | 15 | Mus musculus | Entrez Gene | urn:agi-Binding:inout-urn:agi-llid:9241:inout-urn:agi-llid:650: | digtext:http://www.ncbi.nlm.nih.gov/entrez/utils/fref.fcgi?PrId=3051&itool=AbstractPlus-def&uid=9450925&db=pubmed&url=http://www.genesdev.org/cgi/pmidlookup?view=long&pmid=9450925 | |||||||||||||||||||||||||||||||||||||||||||||||||
| Binding | bmp2a | neutral | bmp4 | This synergy is best explained by formation of BMP2/7 and 4/7 heterodimers. | 15759283:7 | 19 | Mus musculus | mesoderm | urn:agi-Binding:inout-urn:agi-llid:652:inout-urn:agi-llid:650: | Bauer,H.;Meier,A.;Hild,M.;Stachel,S.;Economides,A.;Hazelett,D.;Harland,R.M.;Hammerschmidt,M. | 0012-1606 | 2 | pmquery:(Zebrafish[all+fields]+or+"Danio+rerio"[all+fields]+or+"Zebra+fish"[all+fields])1998/01/01:1999/12/31[edat] | Dev Biol | 488-507 | Dec | 1998 | url(http%3a//dev.biologists.org/cgi/reprint/126/23/5327.pdf):pdf | Follistatin and noggin are excluded from the zebrafish organizer. | 204 | |||||||||||||||||||||||||||||||||||||||
| Binding | bmp2a | neutral | bmp4 | This synergy is best explained by formation of BMP2/7 and 4/7 heterodimers. | 15759283:7 | 19 | Mus musculus | mesoderm | urn:agi-Binding:inout-urn:agi-llid:652:inout-urn:agi-llid:650: | Bauer,H.;Meier,A.;Hild,M.;Stachel,S.;Economides,A.;Hazelett,D.;Harland,R.M.;Hammerschmidt,M. | 0012-1606 | 2 | pmquery:(Zebrafish[all+fields]+or+"Danio+rerio"[all+fields]+or+"Zebra+fish"[all+fields])1998/01/01:1999/12/31[edat] | Dev Biol | 488-507 | Dec | 1998 | url(http%3a//dev.biologists.org/cgi/reprint/126/23/5327.pdf):pdf | Follistatin and noggin are excluded from the zebrafish organizer. | 204 | |||||||||||||||||||||||||||||||||||||||
| Binding | bmp2a | neutral | bmp7 | This synergy is best explained by formation of BMP2/7 and 4/7 heterodimers. | 15759283:7 | 22 | Mus musculus | bone | urn:agi-Binding:inout-urn:agi-llid:655:inout-urn:agi-llid:650: | digtext:http://dev.biologists.org/cgi/reprint/127/2/343.pdf | url(http%3a//dev.biologists.org/cgi/reprint/127/2/343.pdf):pdf | ||||||||||||||||||||||||||||||||||||||||||||||||
| Binding | bmp2a | neutral | bmp7 | This synergy is best explained by formation of BMP2/7 and 4/7 heterodimers. | 15759283:7 | 22 | Mus musculus | bone | urn:agi-Binding:inout-urn:agi-llid:655:inout-urn:agi-llid:650: | digtext:http://dev.biologists.org/cgi/reprint/127/2/343.pdf | url(http%3a//dev.biologists.org/cgi/reprint/127/2/343.pdf):pdf | ||||||||||||||||||||||||||||||||||||||||||||||||
| Binding | bmp2a | neutral | bmpr1a | To determine whether the effect of HGF occurs through known mediators which act downstream of the BMP-2/ALK3 complex, we examined the effect of HGF on BMP-2-induced Smad1 phosphorylation, Smad1/Smad4 complex formation, and Smad1 nuclear translocation. | 10633078:5 | 23 | Mus musculus | Entrez Gene | tubule | urn:agi-Binding:inout-urn:agi-llid:657:inout-urn:agi-llid:650: | digtext:http://www.ncbi.nlm.nih.gov/entrez/utils/fref.fcgi?PrId=3051&itool=AbstractPlus-def&uid=17483092&db=pubmed&url=http://www.jbc.org/cgi/pmidlookup?view=long&pmid=17483092 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Binding | bmp2a | neutral | bmpr1a | To determine whether the effect of HGF occurs through known mediators which act downstream of the BMP-2/ALK3 complex, we examined the effect of HGF on BMP-2-induced Smad1 phosphorylation, Smad1/Smad4 complex formation, and Smad1 nuclear translocation. | 10633078:5 | 23 | Mus musculus | Entrez Gene | tubule | urn:agi-Binding:inout-urn:agi-llid:657:inout-urn:agi-llid:650: | digtext:http://www.ncbi.nlm.nih.gov/entrez/utils/fref.fcgi?PrId=3051&itool=AbstractPlus-def&uid=17483092&db=pubmed&url=http://www.jbc.org/cgi/pmidlookup?view=long&pmid=17483092 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Expression | bmp2a | positive | gata4 | Via bead implantations, the Bmp gradient determines the direction of lateral mesodermal cell migration during dorsal convergence in the zebrafish gastrula. | mutant embryos | 30 | liver progenitors | liver | 1 | Didier Y. R. Stainier | Development | 2007 | |||||||||||||||||||||||||||||||||||||||||||||||
| Expression | bmp2a | negative | ndr1 | In embryos in which Bmp signaling was blocked at 18 hpf, gata4 and gata6 expression was greatly reduced in the liver region at 29-30 hpf. | overexpression | 8 | margin | margin | 2 | Hammerschmidt, M. | Curr Biol | 2007 | |||||||||||||||||||||||||||||||||||||||||||||||
| Expression | bmp2a | negative | acvr1b | overexpression of BMPs compromises endoderm formation, formation of endoderm precursors is negatively regulated by BMPs on the ventral side. | overexpression | 5.25 | mesendoderm | blastoderm | 2 | Thierry Lepage | Development | 2006 | |||||||||||||||||||||||||||||||||||||||||||||||
| Expression | bmp2b | positive | nkx2.5 | At the end of gastrulation, ventral expression of vega2, as that of vega1, was only partly decreased in swr mutant embryos. | mutant embryos | 14 | cardiovascular system | heart primordium | 1 | Didier Y. R. Stainier | Developmental Biology | 2001 | |||||||||||||||||||||||||||||||||||||||||||||||
| Expression | bmp2b | positive | gata5 | prdm1 expression is eliminated at the neural plate border in Bmp2b, expanded in Smad5 and reduced in BMP7 mutant embryos. | mutant embryos | 8 | endoderm | endoderm | 1 | Didier Y. R. Stainier | Developmental Biology | 2001 | |||||||||||||||||||||||||||||||||||||||||||||||
| Expression | bmp2b | positive | ved | At the end of gastrulation, ventral expression of vega2, as that of vega1, was only partly decreased in swr mutant embryos. | mutant embryos | 8 | epiblast | ectoderm | 2 | Hirano, T. | Mechanisms of Development | 2002 | |||||||||||||||||||||||||||||||||||||||||||||||
| Expression | bmp2b | positive | gata4 | Bmp2b (hence zygotic BMP) are required to maintain vox levels during gastrulation. | mutant embryos | 30 | liver progenitors | liver | 1 | Didier Y. R. Stainier | Development | 2007 | |||||||||||||||||||||||||||||||||||||||||||||||
| Expression | bmp2b | positive | bmp2b | In wild-type embryos at 80% epiboly (8.3 hpf), gata5 is expressed in large, flat endodermal cells predominantly on the dorsal side and smaller, rounder mesodermal cells on the ventral side . Swr/bmp2b mutants lack ventral, mesodermal expression of gata5. | mutant embryos | 6 | margin | margin | 1 | Matthias Hammerschmidt | Development | 1999 | |||||||||||||||||||||||||||||||||||||||||||||||
| Expression | bmp2b | positive | bmp4 | At the end of gastrulation, bmp4 expression at the ventral side was completely abolished in swr mutant embryos. | mutant embryos | 5.25 | margin | margin | 1 | Igor B. Dawid | genesis | 2000 | |||||||||||||||||||||||||||||||||||||||||||||||
| Expression | bmp2b | positive | eve1 | In swirl/bmp2b dorsalized mutant embryos, ttl1 expression is reduced at bud and later stages. | overexpression | 8 | margin | margin | 2 | Matthias Hammerschmidt | Developmental Dynamics | 1999 | |||||||||||||||||||||||||||||||||||||||||||||||
| Expression | bmp2b | negative | ndr1 | Ved expression domain expanded to the dorsal margin in bmp2b RNA-injected embryos at the 80% epiboly stage. | overexpression | 8 | margin | margin | 2 | Hammerschmidt, M. | Curr Biol | 2007 | |||||||||||||||||||||||||||||||||||||||||||||||
| Expression | bmp2b | positive | vent | bmp2b-injected embryos show a significant increase of eve1 mRNA levels. | mutant embryos | 5.25 | margin | margin | 1 | Igor B. Dawid | genesis | 2000 | |||||||||||||||||||||||||||||||||||||||||||||||
| Expression | bmp2b | negative | vox | Both bmp2b- and bmp4-injected embryos show a significant increase of eve1 mRNA levels. | mutant embryos | 5.25 | margin | margin | 1 | Igor B. Dawid | genesis | 2000 | |||||||||||||||||||||||||||||||||||||||||||||||
| Expression | bmp2b | positive | bmp2b | In wild-type embryos at 80% epiboly (8.3 hpf), gata5 is expressed in large, flat endodermal cells predominantly on the dorsal side and smaller, rounder mesodermal cells on the ventral side . Swr/bmp2b mutants lack ventral, mesodermal expression of gata5. | mutant embryos | 6 | margin | margin | 1 | Matthias Hammerschmidt | Development | 1999 | |||||||||||||||||||||||||||||||||||||||||||||||
| Expression | bmp2b | positive | bmp4 | At the end of gastrulation, bmp4 expression at the ventral side was completely abolished in swr mutant embryos. | mutant embryos | 5.25 | margin | margin | 1 | Igor B. Dawid | genesis | 2000 | |||||||||||||||||||||||||||||||||||||||||||||||
| Expression | bmp2b | negative | acvr1b | We never found a homozygous laftm110b embryo that had a wild-type or ventralized phenotype, consistent with the Laf/Alk8 receptor functioning downstream of the Bmp2b. | overexpression | 5.25 | mesendoderm | blastoderm | 2 | Thierry Lepage | Development | 2006 | |||||||||||||||||||||||||||||||||||||||||||||||
| Expression | bmp2b | negative | tbx24 | ved expression is down-regulated at late blastula stage in bmp2b signaling mutants. | overexpression | 8 | mesoderm | mesoderm | 2 | Hammerschmidt, M. | Curr. Biol. | 2007 | |||||||||||||||||||||||||||||||||||||||||||||||
| Expression | bmp2b | positive | prdm1a | At the end of gastrulation, ventral expression of vega2, as that of vega1, was only partly decreased in swr mutant embryos. | mutant embryos | 11.66 | neural plate border | neural plate border | 1 | Kristin Bruk Artinger | Developmental Biology | 2005 | |||||||||||||||||||||||||||||||||||||||||||||||
| Expression | bmp2b | positive | tbx2b | Bmp2b (hence zygotic BMP) are required to maintain vox levels during gastrulation. | dominant negative | 16 | proctodeal and ventral yolk | diencephalon | 1 | Kimelman, D. | Development | 2006 | |||||||||||||||||||||||||||||||||||||||||||||||
| Expression | bmp2b | positive | alk8 | Laf/Alk8 as a type I BMP receptor required for the specification of ventral cell fates. | mutant embryos | 4.66 | ventral mesoderm | hypoblast | 1 | Mary C. Mullins | Development | 2001 | |||||||||||||||||||||||||||||||||||||||||||||||
| Expression | bmp4 | positive | chd | The injection of BMP-4 or pCSKAXwnt-8 leads to an inhibition in the expression of chordin (Fig. 7E,F). | 1 | urn:agi-Expression:inout-urn:agi-llid:652:out-urn:agi-llid:8646::positive | digtext:http://www.ncbi.nlm.nih.gov/entrez/utils/fref.fcgi?PrId=3048&itool=AbstractPlus-def&uid=11025206&db=pubmed&url=http://linkinghub.elsevier.com/retrieve/pii/S0925477300004123 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Regulation | bmp4 | positive | dcp1a | Coimmunoprecipitation experiments identified the formation of a complex between SMIF and Smad4, which is enhanced by TGF? or bmp4 treatment (Fig. 2d). | 1 | urn:agi-Regulation:inout-urn:agi-llid:652:out-urn:agi-llid:55802::positive | digtext:http://ad.doubleclick.net/adi/cellbio.nature.com/curr_back;pos=right;lg=no;;sz=120x600;ord=1217141592288? | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Expression | bmp4 | neutral | dlx2a | As epithelial Dlx2 expression in the mandibular arch appaears to be partially regulated by bmp4 (Thomas et al., 2000), we also examined bmp4 expression. | 1 | urn:agi-Expression:inout-urn:agi-llid:652:out-urn:agi-llid:1746::unknown | digtext:http://www.ncbi.nlm.nih.gov/entrez/utils/fref.fcgi?PrId=3051&itool=AbstractPlus-def&uid=15306564&db=pubmed&url=http://dev.biologists.org/cgi/pmidlookup?view=long&pmid=15306564 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Expression | bmp4 | neutral | gata2 | Mutations that abolish this binding also block BMP-4 mediated induction of the gata2 promoter. | 1 | urn:agi-Expression:inout-urn:agi-llid:652:out-urn:agi-llid:2624::unknown | digtext:http://www.ncbi.nlm.nih.gov/entrez/utils/fref.fcgi?PrId=3494&itool=AbstractPlus-nondef&uid=16061939&db=pubmed&url=http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pubmed&pubmedid=16061939 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Regulation | bmp4 | negative | myf5 | bmp4 is a potent antagonist of Shh-mediated Myf5 and MyoD activation in epaxial progenitors, and in the absence of bmp4 signaling, Myf5 and MyoD are expressed ectopically throughout the dermomyotome (Pourquie et al. 1996). | 1 | urn:agi-Regulation:inout-urn:agi-llid:652:out-urn:agi-llid:4617::negative | digtext:http://arjournals.annualreviews.org/doi/full/10.1146/annurev.cellbio.18.012502.105758 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Expression | bmp4 | positive | myf5 | Our experiments indicate that, in the chick embryo, expression of the MyoD and myf5genes is also controlled by the same bmp4/Noggin patterningsystem but at a much later stage of development, i.e. after so-mitogenesis. | 1 | urn:agi-Expression:inout-urn:agi-llid:652:out-urn:agi-llid:4617::positive | digtext:http://dev.biologists.org/cgi/reprint/124/22/4605.pdf | url(http%3a//dev.biologists.org/cgi/reprint/124/22/4605.pdf):pdf | |||||||||||||||||||||||||||||||||||||||||||||||||||
| Regulation | bmp4 | negative | myod1 | bmp4 is a potent antagonist of Shh-mediated Myf5 and MyoD activation in epaxial progenitors, and in the absence of bmp4 signaling, Myf5 and MyoD are expressed ectopically throughout the dermomyotome (Pourquie et al. 1996). | 1 | urn:agi-Regulation:inout-urn:agi-llid:652:out-urn:agi-llid:4654::negative | digtext:http://arjournals.annualreviews.org/doi/full/10.1146/annurev.cellbio.18.012502.105758 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Expression | bmp4 | neutral | myod1 | It has been shown that embryonic expression of Xenopus MyoD or Myf5 requires a specific level of BMP signaling (Re'em-Kalma et al. 1995; Dosch et al. 1997), which is regulated by BMP2, bmp4, and BMP7 expressed in ventral regions of the embryo, and BMP ant | 1 | urn:agi-Expression:inout-urn:agi-llid:652:out-urn:agi-llid:4654::unknown | digtext:http://www.ncbi.nlm.nih.gov/entrez/utils/fref.fcgi?PrId=3051&itool=AbstractPlus-def&uid=9450925&db=pubmed&url=http://www.genesdev.org/cgi/pmidlookup?view=long&pmid=9450925 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Expression | bmp4 | positive | myod1 | Our experiments indicate that, in the chick embryo, expression of the MyoD and myf5genes is also controlled by the same bmp4/Noggin patterningsystem but at a much later stage of development, i.e. after so-mitogenesis. | 1 | urn:agi-Expression:inout-urn:agi-llid:652:out-urn:agi-llid:4654::positive | digtext:http://dev.biologists.org/cgi/reprint/124/22/4605.pdf | url(http%3a//dev.biologists.org/cgi/reprint/124/22/4605.pdf):pdf | |||||||||||||||||||||||||||||||||||||||||||||||||||
| Expression | bmp4 | positive | nkx3.2 | bmp4 beads placed proximally lead to complete lossof Bapx1 expression. | 1 | urn:agi-Expression:inout-urn:agi-llid:652:out-urn:agi-llid:579::positive | digtext:http://www.ncbi.nlm.nih.gov/entrez/utils/fref.fcgi?PrId=3048&itool=AbstractPlus-def&uid=14729484&db=pubmed&url=http://linkinghub.elsevier.com/retrieve/pii/S0012160603006481 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Expression | bmp4 | negative | nkx3.2 | In our mandible experiments, bmp4 was found to inhibit mesenchymal Bapx1 expression; thus, the signals that regulate Bapx1 expression appaear to have different roles in different tissues. | 1 | urn:agi-Expression:inout-urn:agi-llid:652:out-urn:agi-llid:579::negative | digtext:http://www.ncbi.nlm.nih.gov/entrez/utils/fref.fcgi?PrId=3048&itool=AbstractPlus-def&uid=14729484&db=pubmed&url=http://linkinghub.elsevier.com/retrieve/pii/S0012160603006481 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Expression | bmp4 | positive | pax3 | Because Pax3 is expressed in both the neural tube and the paraxial mesoderm, to evaluate whether bmp4 administration affects the expression of Pax3 in somitic cells in response to signals from the axial tissues, we combined quail axial tissues with chick | 1 | urn:agi-Expression:inout-urn:agi-llid:652:out-urn:agi-llid:5077::positive | digtext:http://www.ncbi.nlm.nih.gov/entrez/utils/fref.fcgi?PrId=3051&itool=AbstractPlus-def&uid=9450925&db=pubmed&url=http://www.genesdev.org/cgi/pmidlookup?view=long&pmid=9450925 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Expression | bmp4 | negative | pax3 | These findings indicate that bmp4 signals can block somitic myogenesis in response to signals from the axial tissues downstream of somitic Pax3 gene expression. | 1 | urn:agi-Expression:inout-urn:agi-llid:652:out-urn:agi-llid:5077::negative | digtext:http://www.ncbi.nlm.nih.gov/entrez/utils/fref.fcgi?PrId=3051&itool=AbstractPlus-def&uid=9450925&db=pubmed&url=http://www.genesdev.org/cgi/pmidlookup?view=long&pmid=9450925 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Expression | bmp4 | positive | ptprf | Under these conditions, bmp4 addition induces the generation of a lar ge number of catecholaminer gic cells. | 1 | urn:agi-Expression:inout-urn:agi-llid:652:out-urn:agi-llid:5792::positive | digtext:http://dev.biologists.org/cgi/reprint/127/18/4073.pdf | url(http%3a//dev.biologists.org/cgi/reprint/127/18/4073.pdf):pdf | |||||||||||||||||||||||||||||||||||||||||||||||||||
| Regulation | bmp4 | positive | sim1 | Lateral plate derived bmp4 specifies the lateral somitic compartment resulting in sim1 activation and the inhibition of the onset of myogenesis. | 1 | urn:agi-Regulation:inout-urn:agi-llid:652:out-urn:agi-llid:6492::positive | digtext:http://www.ncbi.nlm.nih.gov/entrez/utils/fref.fcgi?PrId=3048&itool=AbstractPlus-def&uid=9722173&db=pubmed&url=http://linkinghub.elsevier.com/retrieve/pii/S0303-7207(98)00033-1 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Expression | bmp4 | neutral | smad7 | In addition to overexpression we also present genetic evidence that smad7 expression is dependent on BMP2b signaling. | 1 | urn:agi-Expression:inout-urn:agi-llid:652:out-urn:agi-llid:4092::unknown | digtext:http://www3.interscience.wiley.com/blank.html | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Expression | bmp4 | positive | tbx6 | Wnt8 and Bmp2b are required for tbx6 expression. | 1 | urn:agi-Expression:inout-urn:agi-llid:652:out-urn:agi-llid:6911::positive | digtext:http://www.ncbi.nlm.nih.gov/entrez/utils/fref.fcgi?PrId=3051&itool=AbstractPlus-def&uid=15240553&db=pubmed&url=http://dev.biologists.org/cgi/pmidlookup?view=long&pmid=15240553 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Regulation | bmp4 | unknown | bmp2a | In the canals, Bmp2 and Dlx5 are regulated by bmp4, either directly or indirectly. | 2 | urn:agi-Regulation:inout-urn:agi-llid:652:out-urn:agi-llid:650::unknown | digtext:http://www.ncbi.nlm.nih.gov/entrez/utils/fref.fcgi?PrId=3494&itool=AbstractPlus-nondef&uid=18404215&db=pubmed&url=http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pubmed&pubmedid=18404215 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Expression | bmp4 | positive | bmp5 | BMP5 and bmp4 also appaear to up-regulate BMP5 expression in the dorsal forebrain. | 10051661:10184 | 2 | urn:agi-Expression:inout-urn:agi-llid:652:out-urn:agi-llid:653::positive | digtext:http://www.ncbi.nlm.nih.gov/entrez/utils/fref.fcgi?PrId=3494&itool=AbstractPlus-nondef&uid=10051661&db=pubmed&url=http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pubmed&pubmedid=10051661 | |||||||||||||||||||||||||||||||||||||||||||||||||||
| Regulation | bmp4 | unknown | dlx2b | In the canals, Bmp2 and Dlx5 are regulated by bmp4, either directly or indirectly. | 2 | urn:agi-Regulation:inout-urn:agi-llid:652:out-urn:agi-llid:1749::unknown | digtext:http://www.ncbi.nlm.nih.gov/entrez/utils/fref.fcgi?PrId=3494&itool=AbstractPlus-nondef&uid=18404215&db=pubmed&url=http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pubmed&pubmedid=18404215 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Expression | bmp4 | positive | fgf8a | The strongest expression of bmp4 being on the right side, which in turn positively regulates fgf8a expression and prevents initiation of Nodal expression in the right LPM (Roderiguez Esteban et al., 1999 and Yokouchi et al., 1999). | 2 | urn:agi-Expression:inout-urn:agi-llid:652:out-urn:agi-llid:2253::positive | digtext:http://www.ncbi.nlm.nih.gov/entrez/utils/fref.fcgi?PrId=3048&itool=AbstractPlus-def&uid=17395172&db=pubmed&url=http://linkinghub.elsevier.com/retrieve/pii/S0012-1606(07)00179-0 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Binding | bmp4 | neutral | lft1 | In addition, overexpression studies in Xenopus embryos revealed a strong interaction between bmp4 and Lefty1 during LR patterning (Branford et al., 2000). | 2 | urn:agi-Binding:inout-urn:agi-llid:7044:inout-urn:agi-llid:652: | digtext:http://www.ncbi.nlm.nih.gov/entrez/utils/fref.fcgi?PrId=3048&itool=AbstractPlus-def&uid=17395172&db=pubmed&url=http://linkinghub.elsevier.com/retrieve/pii/S0012-1606(07)00179-0 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Expression | bmp4 | positive | lft2 | Our results with the knock down of bmp4 (Fig. 6) demonstrate that the left-sided bmp4 expression in the LPM is required for lefty1 and lefty2 expression and cardiac jogging. | 2 | urn:agi-Expression:inout-urn:agi-llid:652:out-urn:agi-llid:10637::positive | digtext:http://www.ncbi.nlm.nih.gov/entrez/utils/fref.fcgi?PrId=3048&itool=AbstractPlus-def&uid=17395172&db=pubmed&url=http://linkinghub.elsevier.com/retrieve/pii/S0012-1606(07)00179-0 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Expression | bmp4 | neutral | myf5 | It has been shown that embryonic expression of Xenopus MyoD or Myf5 requires a specific level of BMP signaling (Re'em-Kalma et al. 1995 ; Dosch et al. 1997 ), which is regulated by BMP2, bmp4, and BMP7 expressed in ventral regions of the embryo, and BMP a | 9450925:10031 | 2 | Mus musculus | urn:agi-Expression:inout-urn:agi-llid:652:out-urn:agi-llid:4617::unknown | digtext:http://www.ncbi.nlm.nih.gov/entrez/utils/fref.fcgi?PrId=3051&itool=AbstractPlus-def&uid=9450925&db=pubmed&url=http://www.genesdev.org/cgi/pmidlookup?view=long&pmid=9450925 |